Generation of Stable Pentraxin ExpiCHO Cell Lines
DOI:
https://doi.org/10.58445/rars.1438Keywords:
Pentraxin, ExpiCHO , genetic materialAbstract
Transfection – the introduction of foreign genetic material into eukaryotic cells – is used to study gene expression and protein production. There are two types of transfection: transient and stable. Transient transfection involves the foreign DNA being delivered into the cells’ nucleus but degraded as the cells divide. Transient needs to be performed repeatedly to maintain the finite expression, which is inefficient for long-term research. Stable transfection, where the foreign DNA integrates into the cells’ genome, is expressed for months, with the gene of interest being replicated through generations. Transient transfection is completed within three weeks, while stable needs months due to the selection screening. Along with these trade-offs of stable and transient transfection, new technologies and protocols are consistently developed, making it difficult to determine the most efficient and replicable transfection method. This project will determine this by comparing the duration and protein yield of stable and transient transfection. The procedure involves preparing the plasmids for transfection; transfecting the plasmids stably with antibiotics and cloning; transfecting the plasmids transiently; and testing for protein in the cultures. The results show production of Pentraxin I in the Zeocin transient culture was a total of 1.91 mg. Production of Pentraxin I in the Geneticin and Zeocin stable cultures was scarce and requires cloning for a substantial yield. The antibiotic selection phases are complete, with Zeocin finishing in 38 days and Geneticin in 64 days. The next steps are diluting and cloning the stable cultures; testing for protein; and comparing its yield to transient transfection.
References
Biological waste guide [Fact sheet]. (n.d.). Cornell. Retrieved October 10, 2023, from https://ehs.cornell.edu/research-safety/biosafety-biosecurity/biological-waste/biologicalwaste-guide
CHO-K1 [Fact sheet]. (n.d.). ATCC. Retrieved October 9, 2023, from https://www.atcc.org/products/ccl-61
Creation and scale up of a stable cell line using expiCHO™ products. (2019, November 14). ThermoFisher Scientific. Retrieved November 15, 2023, from https://assets.thermofisher.com/TFS-Assets/LSG/manuals/MAN0017764_CreatScaleup_StableCellExpiCHO_UB.pdf
Du Clos T. W. (2013). Pentraxins: structure, function, and role in inflammation. ISRN inflammation, 2013, 379040. https://doi.org/10.1155/2013/379040
Dyson M. R. (2016). Fundamentals of Expression in Mammalian Cells. Advances in experimental medicine and biology, 896, 217–224. https://doi.org/10.1007/978-3-319-27216-0_14
Fus-Kujawa, A., Prus, P., Bajdak-Rusinek, K., Teper, P., Gawron, K., Kowalczuk, A., & Sieron, A. L. (2021). An Overview of Methods and Tools for Transfection of Eukaryotic Cells in vitro. Frontiers in bioengineering and biotechnology, 9, 701031. https://doi.org/10.3389/fbioe.2021.70103
Kim, T. K., & Eberwine, J. H. (2010). Mammalian cell transfection: the present and the future. Analytical and bioanalytical chemistry, 397(8), 3173–3178. https://doi.org/10.1007/s00216-010-3821-6
Ligation protocol with t4 DNA ligase (M0202). (n.d.). New England BioLabs. Retrieved October 29, 2023, from https://www.neb.com/en/protocols/0001/01/01/dna-ligation-with-t4-dna-ligase-m0202
Liu, C., Dalby, B., Chen, W. et al. Transient Transfection Factors for High-Level Recombinant Protein Production in Suspension Cultured Mammalian Cells. Mol Biotechnol 39, 141–153 (2008). https://doi.org/10.1007/s12033-008-9051-x
Makrides S. C. (2003). Vectors for gene expression in mammalian cells. New Comprehensive Biochemistry, 38, 9–26. https://doi.org/10.1016/S0167-7306(03)38002-0
McGirr, B. (n.d.). Protocol for DNA gel electrophoresis. University of Virginia. Retrieved October 29, 2023, from https://engineering.virginia.edu/sites/default/files/common/faculty_groups/lazzara_group/protocols/DNA%20Gel%20Electrophoresis.pdf
Optimizing restriction rndonuclease reactions. (n.d.). New England BioLabs. Retrieved October 29, 2023, from https://www.neb.com/en/protocols/2012/12/07/optimizing-restriction-endonuclease-reactions
PCR protocol for phusion® high-fidelity DNA polymerase (M0530). (n.d.). New England BioLabs. Retrieved November 16, 2023, from https://www.neb.com/en/protocols/0001/01/01/pcr-protocol-m0530
PJS176 plasmid in escherichia coli dh5 alpha [Fact sheet]. (n.d.). ATCC. Retrieved November 15, 2023, from https://www.atcc.org/products/68368
Sambrook, J., Fritsch, E. F., & Maniatis, T. (1989). Molecular cloning: A laboratory manual (2nd ed.). Cold Spring Harbor Laboratory. https://cbsd-my.sharepoint.com/:b:/g/personal/popuri_e019_student_cbsd_org/EZq1EACAfupEnHWkftbWEIgBaxhxB7PouepLdza41dCq7g?e=ZoMnvq
Schad, D. (2020). The blumberg combined protocols [Word document]. https://cbsd-my.sharepoint.com/:w:/g/personal/popuri_e019_student_cbsd_org/EREuLKe_ccRPqGDyGUB2crcBB80_qVMXd4xpbBlYJaDFoA?e=jsJWA0
Stuchbury, G., & Münch, G. (2010). Optimizing the generation of stable neuronal cell lines via pre-transfection restriction enzyme digestion of plasmid DNA. Cytotechnology, 62(3), 189–194. https://doi.org/10.1007/s10616-010-9273-1
ExpiCHO™ expression system user guide. (2018, May 25). ThermoFisher Scientific. Retrieved March 7, 2024, from https://assets.thermofisher.com/TFS-Assets/LSG/manuals/MAN0014337_expicho_expression_system_UG.pdf
Chong, Z. X., Yeap, S. K., & Ho, W. Y. (2021). Transfection types, methods and strategies: a technical review. PeerJ, 9, e11165. https://doi.org/10.7717/peerj.11165
Gray, D. (1997). Overview of protein expression by mammalian cells. Current Protocols. https://doi.org/10.1002/0471140864.ps0509s10
Downloads
Additional Files
Posted
Categories
License
Copyright (c) 2024 Eepsitha Popuri
This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.